CDS

Accession Number TCMCG017C20411
gbkey CDS
Protein Id OMO83175.1
Location complement(75284..76039)
GeneID InterPro:IPR000504
Organism Corchorus olitorius
locus_tag COLO4_22653

Protein

Length 251aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01018017.1
Definition hypothetical protein COLO4_22653 [Corchorus olitorius]
Locus_tag COLO4_22653

EGGNOG-MAPPER Annotation

COG_category A
Description serine arginine-rich splicing factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12891        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000381        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0001178        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031440        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048024        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060260        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000142        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATGGGAGATTGCAAATTGCAATTCCAGTCGATTGGCGTTCGTACTTGTTTTCCATTTTTGTTAGCAATCTTTGTACTAGAGTTTCTAAGAGGGCGTTATGGGATGCTTTCTCTGATTATGGAAAGGTGGCAGATGTTTTCATTCAAAGGAATAACAAAACACAAGGGCCTACAACGTTTGCTTTTGTCAGATTCTGGAAAGAGAAGGATGCTAGATTTGCACTGGAAAAAGCAAATTTTAGATTCTTGGAAGGCATCAGAATCAGAGTGTCCAGTGCCAAGAATAGCAGGAGAACAGTTGTGAGCAACAAGAGCAAATATCCATTGATGAAGCAAGTTGATGAAAGGAGAACGGTTGTTAGAGAATCAAAGGTTGATGGCAGGAGCTTTAAGGAGGTGGTGGTTTTGTCTAGGAATTGCAATGGGGAAAGAGGCGAACCGGCAAAGCAACAAGTCCGCTCAGATACAAATCAGAAGGATGCACAGCAAAGTACTCATTCGGGCAAGGCGATATCGGTGAAGGTAGCCCACTTGGTCGATTCTCCATCAAACGCAGATATGATCGGTGAGAAGGATTTTCATAAGTCTCCTCAATCAAATTTGGTTGTGGAGAAGGAGCAGATATCAACTTGGCAGTCAAGGGATGATTTTGATTTAGAAGTTGACATCCCTAGTGAAGATATGGCATGGTTGGAAAAGTGTGTGGTTGCGTGCTTGAAACCGAATATACTATTGATCAGGTTCGTGAAATAG
Protein:  
MNGRLQIAIPVDWRSYLFSIFVSNLCTRVSKRALWDAFSDYGKVADVFIQRNNKTQGPTTFAFVRFWKEKDARFALEKANFRFLEGIRIRVSSAKNSRRTVVSNKSKYPLMKQVDERRTVVRESKVDGRSFKEVVVLSRNCNGERGEPAKQQVRSDTNQKDAQQSTHSGKAISVKVAHLVDSPSNADMIGEKDFHKSPQSNLVVEKEQISTWQSRDDFDLEVDIPSEDMAWLEKCVVACLKPNILLIRFVK